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Documentation

  • 1. Quick Start
  • 2. Using Segmented Images
  • 3. Example Notebooks
    • 3.1. Generate a Cutting XML from segmentation mask using the Segmentation Loader.
    • 3.2. Generate cutting XML from exported results from QUPath
    • 3.3. Convert SVG graphic into LMD excision instructions
    • 3.4. Generate Calibration Cross Templates for PPS membrane slides
  • 4. API
    • 4.1. lib
    • 4.2. tools
  • .rst

API

4. API#

  • 4.1. lib
    • Collection
    • SegmentationLoader
    • Shape
  • 4.2. tools
    • ellipse()
    • glyph()
    • glyph_path()
    • makeCross()
    • rectangle()
    • text()

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3.4. Generate Calibration Cross Templates for PPS membrane slides

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4.1. lib

By Georg Wallmann, Sophia Mädler and Niklas Schmacke

© Copyright 2023 Georg Wallmann, Sophia Mädler and Niklas Schmacke.