segmentation workflows

Contents

segmentation workflows#

class scportrait.pipeline.segmentation.workflows.WGASegmentation(*args, **kwargs)#

class scportrait.pipeline.segmentation.workflows.ShardedWGASegmentation(*args, **kwargs)#

method#: alias of WGASegmentation

class scportrait.pipeline.segmentation.workflows.DAPISegmentation(*args, **kwargs)#

class scportrait.pipeline.segmentation.workflows.ShardedDAPISegmentation(*args, **kwargs)#

method#: alias of DAPISegmentation

class scportrait.pipeline.segmentation.workflows.DAPISegmentationCellpose(*args, **kwargs)#

class scportrait.pipeline.segmentation.workflows.ShardedDAPISegmentationCellpose(*args, **kwargs)#

method#: alias of DAPISegmentationCellpose

class scportrait.pipeline.segmentation.workflows.CytosolSegmentationCellpose(*args, **kwargs)#

class scportrait.pipeline.segmentation.workflows.ShardedCytosolSegmentationCellpose(*args, **kwargs)#

method#: alias of CytosolSegmentationCellpose

class scportrait.pipeline.segmentation.workflows.CytosolSegmentationDownsamplingCellpose(*args, **kwargs)#

class scportrait.pipeline.segmentation.workflows.ShardedCytosolSegmentationDownsamplingCellpose(*args, **kwargs)#

method#: alias of CytosolSegmentationDownsamplingCellpose

class scportrait.pipeline.segmentation.workflows.CytosolOnlySegmentationCellpose(*args, **kwargs)#

class scportrait.pipeline.segmentation.workflows.ShardedCytosolOnlySegmentationCellpose(*args, **kwargs)#

method#: alias of CytosolOnlySegmentationCellpose

class scportrait.pipeline.segmentation.workflows.CytosolOnlySegmentationDownsamplingCellpose(*args, **kwargs)#

class scportrait.pipeline.segmentation.workflows.ShardedCytosolOnlySegmentationDownsamplingCellpose(*args, **kwargs)#

method#: alias of CytosolOnlySegmentationDownsamplingCellpose