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Ecosystem
Installation
Introduction
Workflow
scPortrait Projects
Config Files
SpatialData
Stitching
Segmentation
Extraction
Featurization
Selection
Tutorials
A Walk Through The scPortrait Ecosystem
Different segmentation workflows
Tools
Parsing
Example Notebook to parse and rename files from experiments imaged on an Opera Phenix microscope
Stitching
Example Stitching Notebook
Code Examples
Code Snippets
Module API
pipeline
project
segmentation
segmentation workflows
extraction
Featurization
selection
processing
io
tools
parse
stitch
ml
.rst
.pdf
processing
Contents
images
masks
processing
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images
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masks
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Contents
images
masks
